= Block 1 - Setup v2 =


== Description ==
These are what is needed to set up a SPC directory with the assumption that it will be used for OSIRIS-REX


== Assumptions ==
 * Bourne-Again Shell (bash) 
 * Group OREX\spc

== Directories  ==
 * Root directory - This is not the actual root directory of a Unix file system, but the top directory of the SPC modeling.  It will contain the other directories needed to support.
 * Working directory - This is where SPC is done (the actual commands)
   * Traditionally  - The working directory is the name of the object.
   * ORex - We will be using the specific shape model version name for the working directory.  The expected naming scheme:  
 * Data directory || OSIRIS_REX||
   * DATA - Where the kernels go
   * NEW_IMAGES_YYYY_DDD - Where the images goes
 * Murphy -- we have directories for volatile backup of [[landmark]] files and [[sumfiles]]


{{{

/root/F3G-Nav/
                   ORex/
                            DATA/
                   base/
                            IMAGEFILES/
                            SHAPEFILES/
                   lsupport/
                   orig/
                   results/
                   test/
}}}
== User inputs ==
 * '''testID''' - Name of the F3 test directory (for example, 'F3E-Limbs')
 * '''blockID''' - User-specified identifier for typescript textfile name (for example, 'Block-01-01-TestDirSetUp-Orig')

== Procedure ==

=== 1. Initial inputs ===
{{{
# User inputs:
testID=F3G-Nav
blockID=Block-01-01-TestDirSetUp-Orig
}}}

=== 2. Set-up ===
{{{
# Set-Up
cd /SPC_Test/$testID
script
date
pwd
ls -l
}}}

=== 3. Synchronize to base directory ===
{{{
# sync to F3-base directory
rsync --delete -ha ../F3-base/orig .
rsync -ha ../F3-base/base/IMAGEFILES base/
}}}
 (./) Not sure if this will be a step in general version.  Need to fix numbering.
{{{
## VARIANCE-F3G: 
rm orig/DATA
ln -s ../ORex/DATA orig/DATA
## END OF VARIANCE
}}}

=== 4. Print details ===
{{{
# Print details
ls -l orig
cat orig/README
ls -l base/IMAGEFILES
cat base/IMAGEFILES/README
}}}

=== 5. Complete procedure ===

{{{
# Block Complete
exit
# Save block log
if [ ! -d /SPC_Test/$testID/log ]; then
  mkdir /SPC_Test/$testID/log
fi
mv typescript /SPC_Test/$testID/log/log-typescript-${blockID}

}}}

----------

''(Compiled by DL)''

CategoryHowTos