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| = STILL BEING EDITED! = |
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| This block batch registers images. | This block batch registers images. Each time you run a batch run of run_script.b (typically would have a different make_scriptR.seed), then run [[blockFinish]] to log the results. |
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| == Assumptions == * You have invoked a Bourne-Again Shell (bash) * You have completed the processing steps in Block 1 - Setup Directory * You have populated the working directory with new images following the steps in: * [[Block 2 - Ingest v2]] |
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| === 2. Set-up === | === Set-up === Ensure make_scriptR.seed is linked to the script you want to run. For starters, you can use one of the default ones. If needed, you can craft something specific and place it in lsupport. |
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| Ensure make_scriptR.seed is linked to the script you want to run. | relink script/make_scriptR_01.seed make_scriptR.seed relink script/make_scriptR_02.seed make_scriptR.seed |
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| === 3. Set-up batch register files === You can populate make_script.in with the images to Register, or if you used the previous block, you can use the below commands. |
=== Set-up batch register files === Replace [[make_script.in]] with a list of images that you want to use. It is important that the first character is blank and the file is terminated with an "END" |
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| grep -v -e SUMFILES -e NOMINALS ../log/step1-2/output.txt | cut -c 1-12 > tmp cat tmp | sed 's/^/ /' > make_script.in echo END >> make_script.in |
sed 's/^/ /' lsupport/imageList.Ap6 > make_script.in echo END >> make_script.in |
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| === 4. Batch register images === | === Batch register images === Build the scripts. We use nohup to ensure that if the login window is lost, the process still runs. |
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| # Build the scripts. make_scriptR # Run the scripts nohup sh run_script.b |
make_scriptR nohup sh run_script.b |
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| === 5. Monitor progress === | === Monitor progress === |
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| # Monitor progress ls -l *.INN *.OOT |
ls *.INN | wc ls *.OOT | wc |
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| === 6. Check results === | === Check results === |
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| support/registerEval.sh mkdir ../log/step1-3 mv *INN *OOT eval* ../log/step1-3 |
registerEval.sh wc evalGood.txt evalBad.txt |
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| === 7. Fix unregistered images === | === Fix unregistered images === |
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| === 8. Clean directory === | === Finish the Block === |
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| # Clean directory sh rem_script.b rm TESTFILES/* rm nohup.out |
blockFinish Ap6 |
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| ''(Compiled by JRW)'' CategoryHowTos |
''(Compiled by EEP)'' |
Block 3 - Register V2
Description
This block batch registers images. Each time you run a batch run of run_script.b (typically would have a different make_scriptR.seed), then run blockFinish to log the results.
Procedure
Set-up
Ensure make_scriptR.seed is linked to the script you want to run. For starters, you can use one of the default ones. If needed, you can craft something specific and place it in lsupport.
relink script/make_scriptR_01.seed make_scriptR.seed relink script/make_scriptR_02.seed make_scriptR.seed
Set-up batch register files
Replace make_script.in with a list of images that you want to use. It is important that the first character is blank and the file is terminated with an "END"
# Create a list of images that need to be processed. sed 's/^/ /' lsupport/imageList.Ap6 > make_script.in echo END >> make_script.in
Batch register images
Build the scripts. We use nohup to ensure that if the login window is lost, the process still runs.
make_scriptR nohup sh run_script.b
Monitor progress
ls *.INN | wc ls *.OOT | wc
Check results
registerEval.sh wc evalGood.txt evalBad.txt
Fix unregistered images
# Fix unregistered images .......
Finish the Block
blockFinish Ap6
(Compiled by EEP)