Block 3 - Register V2
Description
This block batch registers images.
Assumptions
- You have invoked a Bourne-Again Shell (bash)
- You have completed the processing steps in Block 1 - Setup Directory
- You have populated the working directory with new images following the steps in:
Procedure
2. Set-up
Ensure make_scriptR.seed is linked to the script you want to run.
3. Set-up batch register files
You can populate make_script.in with the images to Register, or if you used the previous block, you can use the below commands.
# Create a list of images that need to be processed. grep -v -e SUMFILES -e NOMINALS ../log/step1-2/output.txt | cut -c 1-12 > tmp cat tmp | sed 's/^/ /' > make_script.in echo END >> make_script.in
4. Batch register images
# Build the scripts. make_scriptR # Run the scripts nohup sh run_script.b
5. Monitor progress
# Monitor progress ls -l *.INN *.OOT
6. Check results
support/registerEval.sh mkdir ../log/step1-3 mv *INN *OOT eval* ../log/step1-3
7. Fix unregistered images
# Fix unregistered images .......
8. Clean directory
# Clean directory sh rem_script.b rm TESTFILES/* rm nohup.out
(Compiled by JRW)