This is an important document

Useful stuff

WIKI for Bob Gaskell's StereoPC

Email: MailTo(epalmer AT SPAMFREE psi DOT edu)

General Info

Bob doesn't like to comment his code. Thus, I have no clue what some things do. I've been taking pretty good notes, and I thought we could all share and benefit from what we each have learned. If you figure something out (or get help from Bob himself), be sure to post it. If you need help with the wiki, let me know (or just send me the info).

Programs

Lithos

• ["lithos.e"] - aligns maplets to the current shape model and will provide slight changes to the shape (stored in MAPFILES)

Imager

• ["map_coverage.e"] - shows the coverage that has been processed by resolution

• ["coverage.e"] - shows the global coverage that has been processed by resolution

Shaper

• ["bigmap.e"] - processes maplets to form a bigmap
• ["update_infiles.e"] - generates a list of landmarks and headers for showing coverage

Utilities

• ["find_nofit.e"] - searches for alignments that had problems
• ["make_script.e"] - generates the script that you run to batch align maplets via lithos.e
• ["export.e"] - builds scripts to package up the new maplets/landmarks into a tar ball
• ["importl.e"] - builds script to unpack maplets/landmarks and integrate into a master directory
• ["showmap.e"] - generates an image (.pgm) for a specific bigmap
• ["pr_template"] - (ignore this)

== Work Flow ==

Files

• ["view_maps.in"]
• ["make_scriptT.in"] - Used by ["make_scriptT.e"] to build ["run_script.b"]

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