User Manual Author's Task List

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Category B

shift probably requires Eric to write about. It basically shifts the center of a shape model to the center of its coordinate system, but there is not a lot of info anywhere about how to use it.

Programs

Page	Started	Completed	Review Started	Review Complete	Complete and Handed Over to Bob	Notes
autoregister	DL	DL	JW	JW	YES *
autoregisterP	DL	DL	JW	JW	YES *
bigmap	TC	TC	KD JW	JW	YES *	*FIXED* made SIGMAS.pgm picture look more organized. From JW - Need in add USED_PICS.TXT to this, and make the page for USED_PICS.TXT
bigmapL	TC	TC	KD	KD	YES *	didn't change anything
blemishes	DL	DL	KD	KD	YES *
densify	TC	TC	JW	JW	YES *	*FIXED* Need a paragraph at the beginning that (in plain terms) says what densify does. Also, should define K before you use it.
densifyA	TC	TC	JW	JW	YES *	*FIXED* Are there any substantial differences from densify? Not really -TC
duplicates	DL	DL	JW	JW	YES *
dynamics	TC	TC	KD	KD	YES *	didn't change anything
Export_Import	JW	JW	KD	KD	YES *	didn't change anything
find_nofit	DL	DL	JW	JW	YES *
find_nofitP	KD	KD	JW	JW	YES *	Change LMRK.OOT to <LMRK>.OOT and other similar changes
find_nofitT	KD	KD	JW	JW	YES *	Change LMRK.OOT to <LMRK>.OOT and other similar changes
geometry	TC	TC	JW	JW	YES *	*FIXED* Need more info on how to use the program. What are options 1, 2? Do you run one or other, or both at once? Which one of those is the example from?
lithos	JW	JW	DL	DL	YES *
lithosP	JW	JW	DL	DL	YES *	Unresolved queries: Z:Inspected code and commented on findings - still not sure of what use this option is.
make_list	JW	JW	TC	TC	YES *	Consider revision of the first sentence of description, last part doesn't make sense. Provide example of what LIST.TXT looks like, not clear.
make_lmrklistX	DL	DL	KD	KD	YES *
make_scriptA	DL	DL	KD JW	KD JW	YES *
make_scriptAP	DL	DL	JW	JW	YES *
make_scriptF	DL	DL	JW	JW	YES *
make_scriptP	DL	DL	JW	JW	YES *
make_scriptR	DL	DL	JW	JW	YES *
make_scriptT	DL	DL	KD JW	KD JW	YES *
make_sumfiles	KD	KD	JW	JW	YES *	JW - Looks good to me, but I don't have experience with this program
make_tilefile	DL	DL	KD JW	JW	YES *
MAKE_TILES	KD	KD	JW	JW	YES *	See text for a comment.
MAKE_TILESP	KD	KD	JW	JW	YES *	I changed the last line, also do you have to type that for every *.b file?
map_coverage	KD	KD	TC	TC	YES *	Made a few minor grammatical alterations
new_pole	DL
omega	DL
pole	KD	KD	TC	TC	YES *	Needs compiled by note
process_fits	KD	KD	DL	DL	YES *
process_img	N/A	N/A	N/A	N/A	N/A	Not required
register	DL	DL	JW	JW	YES *
regres	KD	KD	TC	TC	YES*	Need to update PICTLISTR.TXT input file. Need to specify required files/directories to run. needs SUMFILES, NOMINALS, make_sumfiles.txt, etc
rem_done	KD	KD	TC	TC	YES *	Few minor changes
residuals	KD	KD	TC	YES *	What is the second user input? Bob says it is a 'linear residual limit' and the unit is km - but what does Bob mean?
Script Makers Overview	DL	DL	JW	JW	YES *
shape_info	KD	KD	TC	TC	YES *	"Last bit of information is unknown" ..... :-/
shift	EP	EP	JW	JW	YES *
spheremapsB	JW	JW	TC	TC	YES *	Consider revision of description based on Bob's abstract to add some detail and clear some ambiguity. Also page for MAPLIST.TXT is needed.

Directories

Page	Started	Completed	Review Started	Review Complete	Complete and Handed Over to Bob	Notes
BIGFILES	DL	DL	TC	TC	YES *
DATA	KD	KD	TC	TC	YES *
IMAGEFILES	KD	KD	TC	TC	YES *
LMKFILES	TC	TC	JW	JW	YES *
MAPFILES	TC	TC	JW	JW	YES *
NOMINALS	KD	KD	TC	TC	YES *
SHAPEFILES	KD	KD	TC	TC	YES *
SUMFILES	KD	KD	JW	JW	YES *
TESTFILES	DL	DL	KD	KD	YES *
TESTFILES1	DL	DL	KD	KD	YES *
UTILITIES	N/A	N/A	N/A	N/A	N/A	non-OSIRIS not required

Key Input Files

Page	Started	Completed	Review Started	Review Complete	Complete and Handed Over to Bob	Notes
BIGMAP.IN	TC	TC	JW	JW	YES *
BIGLIST.TXT	TC	TC	JW	JW	YES *
DYNAMICS.TXT	TC	TC	KD	KD	YES *	didn't change anything
FONT.INC	N/A	N/A	N/A	N/A	can we delete this?
IFRAME.TXT	KD	KD	JW	JW	YES *
INIT_LITHOS.TXT	KD	KD	JW	JW	YES *
LIMBLIST1.TXT	JW	JW	TC	TC	YES
LMRKLIST.TXT	DL	DL	JW	JW	YES *
LMRKLIST1.TXT	JW	JW	TC	TC	YES *
LMRKLISTO.TXT	JW	JW	TC	TC	YES *
LMRKLISTR.TXT	JW	JW	KD	KD	YES *
LMRKLISTX.TXT	DL	DL	KD	KD	YES *
make_sumfiles.in	KD	KD	JW	JW	YES *
make_sumfiles.txt	KD	KD	JW	JW	YES *
MAPLIST.TXT	JW	JW	TC	TC	YES
PICTLISTR.TXT	JW	JW	TC	TC	YES *
PICTLIST.TXT	KD	KD	JW	JW	YES *
PICTLISTS.TXT	DL	DL	JW	JW	YES
PICTLISTX.TXT	KD	KD	JW	JW	YES *
PICTLISTRX.TXT	JW	JW	TC	TC	YES *

Key Output Files

Page	Started	Completed	Review Started	Review Complete	Complete and Handed Over to Bob	Notes
check.txt	DL	DL	TC	TC	YES *
EMPTY.TXT	DL	DL	TC	TC	YES *
FLATLIST.TXT	DL	DL	TC	TC	YES *
INSIDE.TXT	TC	TC	DL	DL	YES *
LIMINFO.TXT	DL	DL	TC	TC	YES *
LMKVECS.TXT	DL	DL	TC	TC	YES *
MAPCHK.TXT	DL	DL	TC	TC	YES *
MAPINFO.TXT	KD	KD	TC	TC	YES *
MAPRES.TXT	DL	DL	TC	TC	YES *
New_Limbs.in	DL	DL	TC	TC	YES *
NEW_LIST.TXT	DL	DL	TC	TC	YES *
no_update.txt	DL	DL	TC	TC	YES *
OVERLAPS.TXT	JW	JW	TC	TC	YES *
PICINFO.TXT	KD	KD	TC	TC	YES *
PRUNE.TXT	DL	DL	TC	TC	YES *
RANGES_SOLVED.TXT	DL	DL	TC	TC	YES *
redo.txt	DL	DL	TC	TC	YES *
REMOVED.TXT	DL	DL	TC	TC	YES *
RESIDUALS.TXT	KD	KD	TC	TC	YES *
SHAPE.TXT	KD	KD	TC	TC	YES *
SIGMAS.TXT	TC	TC	DL	DL	YES *	I checked the fortran, the column outputs are maximum and average standard deviation of weighted heights at each pixel/line location - comments added to Wiki
SIGMA.TXT	TC	TC	DL	DL	YES *	I added details from SHAPE.TXT regarding line and column values.
USED_MAPS.TXT	TC	TC	DL	DL	YES *
USED_PICS.TXT	TC	TC	DL	DL	YES *
veto.txt	DL	DL	TC	TC	YES *

Support Files

Page	Started	Completed	Review Started	Review Complete	Complete and Handed Over to Bob	Notes
make_script.in	DL	DL	TC	TC	YES *
make_scriptA.seed	DL	DL	TC	TC	YES *
make_scriptAP.seed	N/A	N/A	N/A	N/A	N/A	make_scriptAP uses make_scriptA.seed
make_scriptF.seed	DL	DL	TC	TC	YES *
make_scriptP.seed	DL	DL	TC	TC	YES *
make_scriptR.seed	DL	DL	TC	TC	YES *
make_scriptT.in	DL	DL	TC	TC	YES *
make_scriptT.seed	DL	DL	TC	TC	YES *

Lithos Menu Options

Page	Started	Completed	Review Started	Review Complete	Complete and Handed Over to Bob	Notes
0. Find template	YES *
1. Align landmarks	YES *
2. Find heights	YES *
O. Attach map to maps or limbs	YES *
I. Input landmark	YES *
U. Update landmark files	YES *
C. Create new landmark	YES *
R. Replicate or Rename landmark	YES *
S. Change_scale_qsz_or_orientation	YES *
G. Turn on rename	YES *
N. Find normal	YES *
V. Find_V_Z_or_PTG	YES *
A. Reset albedo or slopes	YES *
M. Get heights from shape model	YES *
B. Get heights from surrounding map	YES *
X. Turn on extract filter	YES *
D. Delete or Disconnect landmark	YES *
E. Eliminate pictures from landmark	YES *
P. Picture status	YES *
L. Turn off picture restriction	YES *
F. Find maplets containing surface point	YES *
Z. Use zoom display	YES *
H. Hide screen output	YES *

How Tos

Page	Started	Completed	Review Started	Review Complete	Complete and Handed Over to Bob	Notes
stage1_description	BM
stage2_description	BM
stage3_description	BM
stage4_description	BM	this one doesn't go in manual--save for later use.
Block 1 - Setup Directory V0	BM
Block 2 - Ingest	BM
Block 3 - Register	BM
Block 4 - Autoregister	BM
Block 5 - Iterate	BM
Block 6A - Lat/Lon Tiling	BM
Block 6B - Bigmap Tiling	BM
Block 7 - Clean	BM

working how tos

Basic Tiling - Achieving the Desired Maplet Overlap	DL
Block 01-01 How to Test Directory Set-Up - ORIG V0	DL	BM
Block 02-01 How to Ingest Images - Test Specific V0	DL	BM
Block 03-01 How to Register Images - Batch V0	DL	BM
Block 03-02 How to Autoregister Images - Batch V0	DL	BM
Block 04-01 How to Iterate Landmarks V0	DL	BM
Block 05-01 How to Tile - Bigmap V0	DL	BM

Front Matter and Bibliography

Page	Started	Completed	Review Started	Review Complete	Complete and Handed Over to Bob	Notes
Scope	pulled directly from the manual
Introduction	BM	modified to include everything that was in the manual
spc_overview	BM	modified to include everything that was in the manual
bibliography	BM	pulled directly from the manual

Outputting to print manual

output_manual_directions	BM	explains the steps for outputting to print manual
ManualOutput	BM	includes all the content set up for outputting to print manual
TestPDFOutput	BM	used for outputting small pieces and tweaking the pdf inputs
TestPDFOutput2	BM	used for testing output of the whole thing--has OLD includes in it

working files

Title Page	BM	don't use: For pdf, it can generate based on inputs in overall file
Copyright Page	BM	don't use: For pdf, this is also generated by inputs in overall file
What This Manual Includes	BM	don't use: early draft
How This Manual Is Organized	BM	﻿don't use: early draft
Who This Manual Is Intended to Help	BM	﻿don't use: early draft
How Standard Items Are Identified	BM	﻿don't use: early draft
Table of Contents	BM	don't use: For pdf, this is generated during output. Can set how many levels of headings to pull, but probably only want one.

Category D

Programs

Page	Started	Completed	Review Started	Review Complete	Notes
coverage
coverage_p	JW	No abstract in code.
dumber
geometryx
harmonics
IMGLATLON
limber
map_coverage_p
ROUGHNESS
shape2maps
shape2mapsA
spheremapsA
triax
vecs2shape

IMAGER

Page	Started	Completed	Review Started	Review Complete	Notes
display
imager_grid
imagar_MG
imager_MGF
make_font
SHOWMAP
view_map_rgb
view_map_stereo
view_shape
view_shapeA
view_shapeC

MAPMAKER

Page	Started	Completed	Review Started	Review Complete	Notes
LIST_MMTILES
MAKE_MMTILES
MAPMAKER

RECOVERY

Page	Started	Completed	Review Started	Review Complete	Notes
endless
GHOSTS
REFRESH_SUMFILES

No Category Listed

Programs

Page	Started	Completed	Review Started	Review Complete	Notes
make_pictlist	EVERYONE ASK KRIS!
make_pictlistX	KD	KD	JW	JW

Key Input Files

Page	Started	Completed	Review Started	Review Complete	Notes
GEOID.TXT
MGRAV.TXT
NEWFILES.TXT
SGRAV.TXT
SHAPEC.TXT

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