find_nofit

Category B	Version 3.0

Description

This program searches batch processing output files to identify landmarks or images which may need further work.

find_nofit is a useful utility for identifying landmarks which may require further work following batch processing tasks such as those that use make_scriptF or make_scriptR.

Required Files

make_script.in - input file for batch processes such as make_scriptF, make_scriptR, make_scriptA or make_scriptAP.

Either:

<LMRKNM>.OOT files - output by a batch process such as make_scriptF.

Or:

<PICNM>.OOT files - output by a batch process such as make_scriptR, make_scriptA or make_scriptAP.

Output Files

Either:

redo.txt - list of landmarks that

terminated in error

do not correlate with at least one image, OR

correlate weakly with at least one image

Or:

REMOVED.TXT - list of landmarks that have been eliminated from at least one image due to low or no correlation.

Using find_nofit

The batch processes initiated by make_scriptF, make_scriptR, make_scriptA and make_scriptAP produce output files <LMKNM>.OOT or <PICNM>.OOT. These are basically listings of the outputs of procedures lithos, register, autoregister and autoregisterP respectively for each input landmark or image. find_nofit looks through these output files for each landmark or picture listed in the make_script.in file to identify landmarks or images that may need further work.

For lithos

If the entries in the make_script.in file are landmarks (make_script.in for lithos runs), the find_nofit procedure identifies:

! cat <LMKNM>.OOT - process still running or terminated in error.* cat <LMKNM>.OOT - maplets not correlating with at least one image.+ cat <LMKNM>.OOT - maplets correlating weakly with at least one image.. cat <LMKNM>.OOT - no correlation for at least one overlap. cat <LMKNM>.OOT - low correlation for at least one overlap.

The cat <LMKNM>.OOT produces a listing of the output file for more complete diagnostics. The program also produces a redo.txt file listing those landmarks that failed one of the first three tests. The limit for weak correlation is set by the 'NOFIT=' keyword in INIT_LITHOS.TXT.

For register

If the entries in the make_script.in file are images (make_script.in for register, autoregister and autoregisterP runs), the find_nofit procedure identifies:

. cat <PICNM>.OOT image not correlating with at least one maplet.

The cat <PICNM>.OOT will produce a listing of the output file for more complete diagnostics. The program also produces a REMOVED.TXT file listing those landmarks that were eliminated from one of the images for low or no correlation.

Here is an annotated sample output from find_nofit :

* cat EE0017.OOT <- maplets not correlating with at least one image cat EE0019.OOT <- low correlation for at least one overlap cat EE0022.OOT. cat EE0027.OOT <- no correlation for at least one overlap+ cat EE0034.OOT <- maplets correlating weakly with at least one image* cat EE0042.OOT* cat EE0044.OOT+ cat EE0045.OOT! cat EE0051.OOT <- process still running or terminated in error! cat EE0053.OOT+ cat EE0054.OOT cat EE0055.OOT! cat EE0063.OOT cat EE0067.OOT cat EE0069.OOT cat EE0081.OOT

Here is an annotated sample redo.txt file from find_nofit :

* EE0017 <- maplets not correlating with at least one image+ EE0034 <- maplets correlating weakly with at least one image* EE0042* EE0044+ EE0045EE0051 <- process still running or terminated in errorEE0053+ EE0054EE0063END

Here is an annotated sample REMOVED.TXT file from find_nofit :

AA0001 <- maplet eliminated from an image for low or no correlationAF0023

(Compiled by DL)

CategoryPrograms