Differences between revisions 1 and 2

find_nofitP

Compiled by KD

The batch process initiated by make_scriptP produces output files LMKNM.OOT, containing listings of the lithosP standard outputs for each input landmark. find_nofitP searches the .OOT files for each landmark listed in make_script.in to identify landmarks which may need further work.

The find_nofit procedure identifies:

 ! cat LMKNM.OOT  process still running or terminated in error.
 * cat LMKNM.OOT  maplets not correlating with at least one image.
 . cat LMKNM.OOT  no correlation for at least one overlap.
   cat LMKNM.OOT  low correlation for at least one overlap.

The cat LMKNM.OOT will produce a listing of the output file for more complete diagnostics. The program also produces a redo.txt file listing those landmarks that failed one of the first three tests.

The limit for weak correlation is set by the 'NOFIT=' keyword in INIT_LITHOS.TXT. The limit for weak correlation is fixed at either 0.43 (~3/7) if NOFIT>0.35 or 0.28 (~2/7) otherwise by the display from the CORRELATE subroutine in LITHOSP.

Required Files

make_script.in - input file for batch processing using make_scriptP.
LMKNM.OOT files - lithosP standard output listings

Output Files

redo.txt - list of landmarks which terminated in error, do not correlate with at least one image, or correlate weakly with at least one image.

Example of Output

! cat EE0004.OOT       <- process still running or terminated in error
  cat EE0005.OOT       <- low correlation for at least one overlap
. cat EE0006.OOT       <- no correlation for at least one overlap 
  cat EE0007.OOT 
* cat EE0008.OOT       <- maplets not correlating with at least one image 
* cat EE0009.OOT 
. cat EE0010.OOT 
* cat EE0011.OOT 
  cat EE0013.OOT 
  cat EE0017.OOT 
! cat EE0022.OOT

Example redo.txt file:

EE0004                <- process still running or terminated in error
* EE0008              <- maplets not correlating with at least one image
* EE0009
* EE0011
EE0022
END

CategoryPrograms

-  ⇤ ← Revision 1 as of 2016-01-26 10:29:54 → 
  Size: 1672
  Editor: DianeLambert
  Comment:
+   ← Revision 2 as of 2016-01-26 16:24:30 → ⇥
  Size: 2131
  Editor: DianeLambert
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 5:
-At the end of each tiling or iteration, a form of find_nofit (T or P) is used to check for bad landmarks.
+The batch process initiated by [[make_scriptP]] produces output files LMKNM.OOT, containing listings of the [[lithosP]] standard outputs for each input landmark.  find_nofitP searches the .OOT files for each landmark listed in [[make_script.in]] to identify landmarks which may need further work.
 Line 7:
- * find_nofitT - this routine shows which maplets created during tiling that are faulty.
+The find_nofit procedure identifies:
{{{
 ! cat LMKNM.OOT  process still running or terminated in error.
 * cat LMKNM.OOT  maplets not correlating with at least one image.
 . cat LMKNM.OOT  no correlation for at least one overlap.
   cat LMKNM.OOT  low correlation for at least one overlap.
}}}
-Line 9:
+Line 15:
- * find_nofitP - this routine shows which maplet created during iteration that are faulty.
+The cat LMKNM.OOT will produce a listing of the output file for more complete diagnostics.  The program also produces a [[redo.txt]] file listing those landmarks that failed one of the first three tests.
-Line 11:
+Line 17:
-The routines listed above determine faulty maplets by going through every .OOT file in the working directory, which are produced at the end of tiling and iteration when run_script.sh or run.sh are used.
+The limit for weak correlation is set by the 'NOFIT=' keyword in INIT_LITHOS.TXT. The limit for weak correlation is fixed at either 0.43 (~3/7) if NOFIT>0.35 or 0.28 (~2/7) otherwise by the display from the CORRELATE subroutine in LITHOSP.
-Line 13:
+Line 19:
+=== Required Files ===
 * [[make_script.in]] - input file for batch processing using [[make_scriptP]].
 * LMKNM.OOT files - [[lithosP]] standard output listings
-Line 14:
+Line 23:
-=== Input ===
 * <3 digit number>.OOT files in the working directory

=== Output ===
 * ! - currently running (logfile isn't complete) or there was an error and the landmark was deleted
 * (blank space)  LMKNM - minor issue
 * * LMKNM - major issue (at least one image didn't correlate at all the with the map)
 * . LMKNM - minor issue (at least one maplet overlap error)
 * + LMKNM - moderate issue (at least one image had a correlation below the value set in init_lithos - usually .3 or .4)
+=== Output Files ===
 * [[redo.txt]] - list of landmarks which terminated in error, do not correlate with at least one image, or correlate weakly with at least one image.
-Line 26:
+Line 28:
-EQ0004:   cat 004.OOT 
EP0002:   cat 005.OOT 
EP0003:   cat 006.OOT 
EO0003:   cat 007.OOT 
EN0003: * cat 008.OOT 
EN0004: * cat 009.OOT 
EM0003: . cat 010.OOT 
EM0004: * cat 011.OOT 
132 deleted
   !  cat 132.OOTThe
+! cat EE0004.OOT       <- process still running or terminated in error
  cat EE0005.OOT       <- low correlation for at least one overlap
. cat EE0006.OOT       <- no correlation for at least one overlap 
  cat EE0007.OOT 
* cat EE0008.OOT       <- maplets not correlating with at least one image 
* cat EE0009.OOT 
. cat EE0010.OOT 
* cat EE0011.OOT 
  cat EE0013.OOT 
  cat EE0017.OOT 
! cat EE0022.OOT
-Line 38:
+Line 41:
-== John's notes ==
!ZN0205 cat 023.OOT  process still running (okay) or process didn’t finish normally (bummer).

ZN0205 cat 023.OOT no correlation in at least one maplet overlap.  Probably no big deal.

* ZN0205 cat 023.OOT small or no correlation in at least one maplet-image overlap.  Should be checked by hand in LITHOS.
+Example [[redo.txt]] file:
{{{
EE0004                <- process still running or terminated in error
* EE0008              <- maplets not correlating with at least one image
* EE0009
* EE0011
EE0022
END
}}}