Differences between revisions 1 and 5 (spanning 4 versions)

find_nofitP

Compiled by KD

The batch process initiated by make_scriptP produces output files <LMKNM>.OOT, containing listings of the lithosP standard outputs for each input landmark. find_nofitP searches the <LMKNM>.OOT files for each landmark listed in make_script.in to identify landmarks which may need further work.

See find_nofit to identify the flags thrown by find_nofitP:

"cat <LMKNM>.OOT" will produce a listing of the output file for more complete diagnostics. The program also produces a redo.txt file listing those landmarks that failed one of the first three tests.

The limit for weak correlation is set by the 'NOFIT=' keyword in INIT_LITHOS.TXT. The limit for weak correlation is fixed at either 0.43 (~3/7) if NOFIT>0.35 or 0.28 (~2/7) otherwise by the display from the CORRELATE subroutine in LITHOSP.

Required Files

make_script.in - input file for batch processing using make_scriptP.
<LMKNM>.OOT files - lithosP standard output listings

Output Files

redo.txt - list of landmarks which terminated in error, do not correlate with at least one image, or correlate weakly with at least one image.

Example of Output

! cat EE0004.OOT       <- process still running or terminated in error
  cat EE0005.OOT       <- low correlation for at least one overlap
. cat EE0006.OOT       <- no correlation for at least one overlap 
  cat EE0007.OOT 
* cat EE0008.OOT       <- maplets not correlating with at least one image 
* cat EE0009.OOT 
. cat EE0010.OOT 
* cat EE0011.OOT 
  cat EE0013.OOT 
  cat EE0017.OOT 
! cat EE0022.OOT

Example redo.txt file:

EE0004                <- process still running or terminated in error
* EE0008              <- maplets not correlating with at least one image
* EE0009
* EE0011
EE0022
END

CategoryPrograms

-  ⇤ ← Revision 1 as of 2016-01-26 10:29:54 → 
  Size: 1672
  Editor: DianeLambert
  Comment:
+   ← Revision 5 as of 2016-01-28 15:03:10 → ⇥
  Size: 1907
  Editor: DianeLambert
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
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-At the end of each tiling or iteration, a form of find_nofit (T or P) is used to check for bad landmarks.
+The batch process initiated by [[make_scriptP]] produces output files <LMKNM>.OOT, containing listings of the [[lithosP]] standard outputs for each input landmark.  find_nofitP searches the <LMKNM>.OOT files for each landmark listed in [[make_script.in]] to identify landmarks which may need further work.
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- * find_nofitT - this routine shows which maplets created during tiling that are faulty. 

 * find_nofitP - this routine shows which maplet created during iteration that are faulty.

The routines listed above determine faulty maplets by going through every .OOT file in the working directory, which are produced at the end of tiling and iteration when run_script.sh or run.sh are used.
+See [[find_nofit]] to identify the flags thrown by find_nofitP:
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+Line 10:
-=== Input ===
 * <3 digit number>.OOT files in the working directory
+"cat <LMKNM>.OOT" will produce a listing of the output file for more complete diagnostics.  The program also produces a [[redo.txt]] file listing those landmarks that failed one of the first three tests.
-Line 17:
+Line 12:
-=== Output ===
 * ! - currently running (logfile isn't complete) or there was an error and the landmark was deleted
 * (blank space)  LMKNM - minor issue
 * * LMKNM - major issue (at least one image didn't correlate at all the with the map)
 * . LMKNM - minor issue (at least one maplet overlap error)
 * + LMKNM - moderate issue (at least one image had a correlation below the value set in init_lithos - usually .3 or .4)
+The limit for weak correlation is set by the 'NOFIT=' keyword in INIT_LITHOS.TXT. The limit for weak correlation is fixed at either 0.43 (~3/7) if NOFIT>0.35 or 0.28 (~2/7) otherwise by the display from the CORRELATE subroutine in LITHOSP.

=== Required Files ===
 * [[make_script.in]] - input file for batch processing using [[make_scriptP]].
 * <LMKNM>.OOT files - [[lithosP]] standard output listings

=== Output Files ===
 * [[redo.txt]] - list of landmarks which terminated in error, do not correlate with at least one image, or correlate weakly with at least one image.
-Line 26:
+Line 23:
-EQ0004:   cat 004.OOT 
EP0002:   cat 005.OOT 
EP0003:   cat 006.OOT 
EO0003:   cat 007.OOT 
EN0003: * cat 008.OOT 
EN0004: * cat 009.OOT 
EM0003: . cat 010.OOT 
EM0004: * cat 011.OOT 
132 deleted
   !  cat 132.OOTThe
+! cat EE0004.OOT       <- process still running or terminated in error
  cat EE0005.OOT       <- low correlation for at least one overlap
. cat EE0006.OOT       <- no correlation for at least one overlap 
  cat EE0007.OOT 
* cat EE0008.OOT       <- maplets not correlating with at least one image 
* cat EE0009.OOT 
. cat EE0010.OOT 
* cat EE0011.OOT 
  cat EE0013.OOT 
  cat EE0017.OOT 
! cat EE0022.OOT
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+Line 36:
-== John's notes ==
!ZN0205 cat 023.OOT  process still running (okay) or process didn’t finish normally (bummer).

ZN0205 cat 023.OOT no correlation in at least one maplet overlap.  Probably no big deal.

* ZN0205 cat 023.OOT small or no correlation in at least one maplet-image overlap.  Should be checked by hand in LITHOS.
+Example [[redo.txt]] file:
{{{
EE0004                <- process still running or terminated in error
* EE0008              <- maplets not correlating with at least one image
* EE0009
* EE0011
EE0022
END
}}}