make_scriptA

Category B

Version 3.0

Description

This program generates the run script and .INN files required to batch autoregister new images.

Required Files

input file:

seed file:

processed files:

Output Files

make_scriptA outputs:

run_script.b output:

processed files output:


Using make_scriptA

  1. Create Input Files

Here is a sample make_script.in file (see that entry for further information):

 P00045000450
 P00045000451
 P00045000452
END

Here is a sample make_scriptA.seed file (see that entry for further information):

a
0,65,.25,0,3
1
2
n
0
n
o
.5
4
b
0
q
END   
  1. Run make_scriptA

make_scriptA generates a .INN file for each image. It consists of the image filename followed by the autoregister options contained in the make_scriptA.seed file.

Here is a sample .INN file for image P00045000450:

P00045000450
y
0.5
n
a                   
0,65,.25,0,3        
1                   
2                   
n                   
0                   
n                   
o                   
.5                  
4                   
b                   
0                   
q                   

make_scriptA also generates the run_script.b script. Here is a sample run script file for image P00045000450:

rm -f P00045000450.OOT
/usr/local/bin/AUTOREGISTER < P00045000450.INN > P00045000450.OOT
cp LMRK_DISPLAY1.pgm ./TESTFILES/P00045000450.pgm
rm -f P00045000451.OOT
/usr/local/bin/AUTOREGISTER < P00045000451.INN > P00045000451.OOT
cp LMRK_DISPLAY1.pgm ./TESTFILES/P00045000451.pgm
rm -f P00045000452.OOT
/usr/local/bin/AUTOREGISTER < P00045000452.INN > P00045000452.OOT
cp LMRK_DISPLAY1.pgm ./TESTFILES/P00045000452.pgm
  1. Batch Autoregister Images

    /!\ autoregister uses the file LMRKLISTX.TXT to prescreen the maplets. If you have added or deleted maplets recently, you should run make_lmrklistX.

Here is a sample command line for running run_script.b:

sh run_script.b

The autoregister standard output for each image is captured in the .OOT files. The LMRKDISPLAY1.pgm file output by autoregister is copied and stored in TESTFILES/ once an image has been processed. You must review the .OOT files to ascertain the success of the batch image autoregistration process.


(Compiled by DL)

CategoryPrograms

make_scriptA (last edited 2016-06-06 13:09:14 by DianeLambert)