= make_scriptR =

'''Purpose:''' Generates the run and .INN files required to batch register new images.

=== Requires ===

 * make_script.in - text file containing the names of the images to batch register. 
 * [[make_scriptR.seed]] - text file containing the register option commands for batch registering images.

=== Output ===

 * run_script.b - run script for batch image registration.
 * .INN files - register seed file for each image.

== Using make_scriptR ==

=== Create Input Files ===

Example '''make_script.in''' file:

{{{
 P3T11S2H0409.DAT
 P3T11S2H0410.DAT
 P3T11S2H0411.DAT
END
}}}

NB: A space must precede each image filename.

Example '''make_scriptR.seed''' file (see [[make_scriptR.seed]] for further details):

{{{
s
20
3
y
XSTOP
1
10
3
y
XSTOP
0
y
n
n
q
}}}

== Run make_scriptR ==

make_scriptR generates a .INN file for each image (the image filename appended with the register options contained in the make_scriptR.seed file. Example '''P3T11S2H0409.INN''' file:

{{{
P3T11S2H0409
s                   
20                  
3                   
y                   
XSTOP               
1                   
10                  
3                   
y                   
XSTOP               
0                   
y                   
n                   
n                   
q                   
}}}

make_scriptR also generates the run script - '''run_script.b''':

{{{
rm -f P3T11S2H0409.OOT
/usr/local/bin/REGISTER < P3T11S2H0409.INN > P3T11S2H0409.OOT
cp TEMPFILE.pgm ./TESTFILES/P3T11S2H0409.pgm
rm -f P3T11S2H0410.OOT
/usr/local/bin/REGISTER < P3T11S2H0410.INN > P3T11S2H0410.OOT
cp TEMPFILE.pgm ./TESTFILES/P3T11S2H0410.pgm
rm -f P3T11S2H0411.OOT
/usr/local/bin/REGISTER < P3T11S2H0411.INN > P3T11S2H0411.OOT
cp TEMPFILE.pgm ./TESTFILES/P3T11S2H0411.pgm
}}}

== Batch Register Images ==

{{{
sh run_script.b
}}}

The register standard output for each image is captured in .OOT files. The user must review the .OOT files to ascertain the success of the batch image registration process. (A ''find-nofit'' program does not currently exist for batch image registration.)