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| = process_fits = | = PROCESS_FITS = ||Category B ||Version 3.0.1 || |
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| == Descriptions == | |
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| This routine reads a FITS image file, extracts relevant information from the header, adds a record to the [[make_sumfiles.in]] file, and adds a raw 8- or 16- bit image to the [[IMAGEFILES]] directory. | == Description == This program |
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| == Input Files == * FITS image file, name provided in stdin |
* reads a FITS image file * extracts relevant information from the header * adds a record to the [[make_sumfiles.in]] file * adds a raw 16- bit unsigned integer image to the [[IMAGEFILES]] directory |
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| == Input stdin == | [[SPC-OREx Naming Convention]] |
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| * FITS image file name | ---- = Level 0 = The data stored in each image file contained in the [[IMAGEFILES]] directory is a scaled unsigned integer (as 14 bits folded into 16 bits), with the exclusion of values less than 0. Acceptable values are from 0 to 16,383. == ECR Changes from 3.0A2 == * Support OREx level 0 images * Trim the second channel from the image to make it 1024x1024 * Remove dark/bias -- This comes from the shielded overscan region * Correct the flat field * Desmear the image === Required Files === * FITS image file - You provide the name as part of the standard input. * DATA/[[DN2TEMP.TXT]] * DATA/[[FLATFILES.TXT]] === Outputs === * a row for the image is appended to [[make_sumfiles.in]] * 16-bit unsigned integer image(s) are stored to [[IMAGEFILES]] directory. Stretched from 0 to 65536 = WARNING == * The program [[display]] will put the 0,0 position of the image in the top left, but OREx wants 0,0 to be in the bottom left. ---- = Level 1 = If the source is a real (or 32-bit float) value '''process_fits''' takes the original images' data float and calculates the maximum value. Then it scales the data to spread from 0 to 65536 to maximize the accuracy of the stored data. === Required Files === * FITS image file - You provide the name as part of the standard input. === Outputs === * a row for the image is appended to [[make_sumfiles.in]] * 16-bit unsigned integer image(s) are stored to [[IMAGEFILES]] directory. Stretched from 0 to 65536 ---------- == Using process_fits == process_fits can be run in two modes * Single file - just give the FITS filename at the prompt * Batch mode * If the file [[newpic.txt]] exists, then process_fits will search through ../OSIRIS_REX/NEW_IMAGES to find the image and process. [[NEW_IMAGES]] is configured as YYYY/DOY/<source images> Here is a sample of the standard input: |
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| Input filename 2019-01-20T22-47-05.541_PCAM_L0b_V004.fits OKAY 2019 JAN 20 22:47:05.050 EXPOSURE(ms) = 100.000 MSB SIGNED 0.00 0.00 0.00 0.00 0.00 5.0000000000000000 P601296494J3 }}} ---------- |
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| }}} | Old - [[process_fits-3.0A2]] |
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| == Output == * a row for the image entered into the routine is made in [[make_sumfiles.in]] * a raw 16- or 18- bit image(s) to [[IMAGEFILES]] directory |
''(Compiled by EP)'' ---- CategoryThreeOhOne |
PROCESS_FITS
Category B |
Version 3.0.1 |
Description
This program
- reads a FITS image file
- extracts relevant information from the header
adds a record to the make_sumfiles.in file
adds a raw 16- bit unsigned integer image to the IMAGEFILES directory
Level 0
The data stored in each image file contained in the IMAGEFILES directory is a scaled unsigned integer (as 14 bits folded into 16 bits), with the exclusion of values less than 0. Acceptable values are from 0 to 16,383.
ECR Changes from 3.0A2
- Support OREx level 0 images
- Trim the second channel from the image to make it 1024x1024
- Remove dark/bias -- This comes from the shielded overscan region
- Correct the flat field
- Desmear the image
Required Files
- FITS image file - You provide the name as part of the standard input.
DATA/DN2TEMP.TXT
DATA/FLATFILES.TXT
Outputs
a row for the image is appended to make_sumfiles.in
16-bit unsigned integer image(s) are stored to IMAGEFILES directory. Stretched from 0 to 65536
= WARNING ==
The program display will put the 0,0 position of the image in the top left, but OREx wants 0,0 to be in the bottom left.
Level 1
If the source is a real (or 32-bit float) value process_fits takes the original images' data float and calculates the maximum value. Then it scales the data to spread from 0 to 65536 to maximize the accuracy of the stored data.
Required Files
- FITS image file - You provide the name as part of the standard input.
Outputs
a row for the image is appended to make_sumfiles.in
16-bit unsigned integer image(s) are stored to IMAGEFILES directory. Stretched from 0 to 65536
Using process_fits
process_fits can be run in two modes
- Single file - just give the FITS filename at the prompt
- Batch mode
If the file newpic.txt exists, then process_fits will search through ../OSIRIS_REX/NEW_IMAGES to find the image and process. NEW_IMAGES is configured as YYYY/DOY/<source images>
Here is a sample of the standard input:
Input filename
2019-01-20T22-47-05.541_PCAM_L0b_V004.fits
OKAY
2019 JAN 20 22:47:05.050
EXPOSURE(ms) = 100.000
MSB SIGNED
0.00 0.00 0.00 0.00 0.00
5.0000000000000000
P601296494J3
Old - process_fits-3.0A2
(Compiled by EP)