Block-02-01 - INGEST IMAGES - TEST-SPECIFIC

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##                                                                      ##
##                             BLOCK 02-01                              ##
##                     INGEST IMAGES - TEST-SPECIFIC                    ##
##                                                                      ##
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## This block additionally populates the F3 orig directory's IMAGEFILES/
## NOMINALS/ and SUMFILES/ sub-directories with Detailed Survey image files 
## which are consistent across sub-tests in readiness for registering
## Detailed Survey images


## Assumptions:
## User has invoked a Bourne-Again Shell (bash) on ormacsrv1.lpl.arizona.edu
## User is a member of the group OREX\spc
## User has set up a skeleton directory in the following format:
## /SPC_Test/F3G-Nav/
##                   ORex/
##                            DATA/
##                   base/
##                            IMAGEFILES/
##                            SHAPEFILES/
##                   lsupport/
##                   orig/
##                   results/
##                   test/
## User has completed the processing steps comprising Block 01-01 - TEST DIRECTORY 
## SET-UP - ORIG

## User inputs:
## testID: Name of the F3 test directory (for example, F3E-Limbs)
## blockID: User-specified identifier for typescript textfile name 
##          (for example, Block-02-01-IngestImages-TestSpecific)

# User inputs:
testID=F3G-Nav
blockID=Block-02-01-IngestImages-TestSpecific

# Set-Up
cd /SPC_Test/$testID
script
date
pwd
ls -l

## VARIANCE-F3G:

# Populate base/IMAGEFILES/ with Detailed Survey test image files
rsync -ha base/F3G-IMAGEFILES/M60* base/IMAGEFILES/
rsync -ha base/F3G-IMAGEFILES/P60* base/IMAGEFILES/
ls -l base/IMAGEFILES/

# Populate orig/NOMINALS/ with Detailed Survey MapCam image nominals
rsync -ha base/F3G-DSM-NOMINALS/M60* orig/NOMINALS/
ls -l orig/NOMINALS

# Populate orig/SUMFILES/ with Detailed Survey MapCam image sumfiles
rsync -ha base/F3G-DSM-SUMFILES/M60* orig/SUMFILES/
ls -l orig/SUMFILES

## END OF VARIANCE

# Generate lsupport/PICTLIST.TXT
ls base/IMAGEFILES/M* | cut -d '/' -f 3 | cut -d '.' -f 1 > lsupport/PICTLIST.TXT
ls base/IMAGEFILES/P* | cut -d '/' -f 3 | cut -d '.' -f 1 >> lsupport/PICTLIST.TXT
sed -i -e 's/^/ /' lsupport/PICTLIST.TXT 
echo END >> lsupport/PICTLIST.TXT
## VARIANCE-F3G:
# App and PS MapCam and PolyCam images and DS MapCam images 
# in the region-of-interest only
awk '/M/ { print $1 }' lsupport/PICTLIST-TAG1-100mx100m.TXT > lsupport/PICTLIST.TXT
awk '/P59/ { print $1 }' lsupport/PICTLIST-TAG1-100mx100m.TXT >> lsupport/PICTLIST.TXT
sed -i -e 's/^/ /' lsupport/PICTLIST.TXT 
echo END >> lsupport/PICTLIST.TXT
## END OF VARIANCE
cat lsupport/PICTLIST.TXT

# Generate list of images which require registering/autoregistering
## VARIANCE-F3G:
# DS MapCam images within the region-of-interest only.
# (PolyCam imgaes not included since the perturbations differ from sub-test to sub-test.)
awk '/M60/ { print $1 }' lsupport/PICTLIST-TAG1-100mx100m.TXT > lsupport/PICTLIST-forRegistering.TXT
sed -i -e 's/^/ /' lsupport/PICTLIST-forRegistering.TXT 
echo END >> lsupport/PICTLIST-forRegistering.TXT
## END OF VARIANCE
cat lsupport/PICTLIST-forRegistering.TXT

# Block Complete
exit
# Save block log
if [ ! -d /SPC_Test/$testID/log ]; then
  mkdir /SPC_Test/$testID/log
fi
mv typescript /SPC_Test/$testID/log/log-typescript-${blockID}