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Comment:
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= make_scriptT =
(Compiled by DL)
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'''Purpose:''' Generates the run script and .INN files required to tile a bigmap or shape with a suite of new maplets.
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= Step1 =
Set up the files for the rn
=== Requires ===
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= Step2 =
Run and monitor
 * [[make_scriptT.in]] - text file containing references to the bigmap and make_scriptT.seed file, and the bigmap pixel/line locations for the centers of each new maplet.
 * [[make_scriptT.seed]] - text file containing the [[lithos]] option commands for generating each maplet.
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------ NB: [[lithos]] requires a number of directories and files - refer to relevant guide.
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= Step1 = === Output ===
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== Overview == make_scriptT outputs:
 * run_script.b - run script for maplet creation.
 * .INN files - lithos seed file for each new maplet.
 * rem_script.b - run script to clean out the directory of make_scriptT working files once tiling is complete and user has quality checked the resulting suite of maplets.
run_script.b output:
 * .OOT files - standard output from lithos for each new maplet.
 * [[SUMFILES]]/ - S/C and camera information are updated by [[lithos]] as image shifts are accepted. New landmarks and limb fits are added to the SUMFILEs;
 * [[LMKFILES]]/ - LMKFILES for each new maplet are created and populated by [[lithos]].
 * [[MAPFILES]]/ - MAPFILES for each new maplet are created and populated by [[lithos]].
 * a number of information text and display files in the working directory are modified by [[lithos]]; please refer to the relevant guide for details.
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The will use XXXXXX and XXX020.SEED to generate a suite of files to tile a bigmap. == Using make_scriptT ==
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There are a multitude of procedures the user should follow before running make_scriptT; please refer to the [[Basic_tiling]] 'How-To' guide.
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Output will be exact (diff) === Create Input Files ===
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== Prep ==

Copy the reference map to XXXXXX (because Bob likes it that way)
{{{
cp MAPFILES/REFMAP.MAP MAPFILES/XXXXXX.MAP
}}}

Add map name and seed to the top of the output from [[make_tilefile]], which should be named [[make_scriptT.in]]

It should look like this:
Example '''make_scriptT.in''' file (see [[make_scriptT.in]] for further details):
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XXX020.SEED scripts/t11-10.seed
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     250  50
     300  50
     350  50
     400  50
     450  50
     500  50
     550  50
     600  50
...
     9
00  950
     950 950
      50 100
     100 100
     150 100
200 100
      
50 150
     100 150
     150 150
     200 150
      50 200
     100 200
     150 200
     200 200
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== Run == Example '''make_scriptT.seed''' file (see [[make_scriptT.seed]] for further details):
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~/bin/make_scriptT 0.00010,49
g
i
a
y
.5
n
x
.025
0
a
b
n
XXXXXX
n
2
b
n
XXXXXX
u
1
v
2
e
a
0,60,.25,.25,0,3
1
0
3
n
0
y


...


u
1
o
RECENT
y
1
o
RECENT
n
3
y
1, 3, 5 w
i
RECENT
n
n
v
1
u
1
v
4
o
RECENT
n
1
q
END
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== Output == == Run make_scriptT ==
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 . INN files (1 to 361)
 . rem_script.b
 . run_script.b
 . dsp_list.txt
make_scriptT generates a .INN file for each new maplet. The first five lines of the .INN file (see below) create a new landmark in [[lithos]], with a center at the correct bigmap pixel/line location or shape model lat/wlon location. The landmark, initially monikered 'a', is auto-renamed by [[lithos]] (option g) depending on its global lat/long region, for example 'EE0001'. The bigmap is referred to via a temporary file, named XXXXXX. The user must copy the current bigmap to MAPFILES/XXXXXX.MAP.
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------ Example '''001.INN''' file:
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= Step 2 = {{{
c
a
m
XXXXXX
   50.000000000000000 50.000000000000000
0.00010,49
g
i
etc ...
}}}
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make_scriptT also generates the run script - '''run_script.b''':
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== Run == {{{
rm -f 001.OOT
/usr/local/bin/LITHOS < 001.INN > 001.OOT
cp LMRK_DISPLAY1.pgm ./TESTFILES/001.pgm
cp tmpl.pgm ./TESTFILES1/001.pgm
rm -f 002.OOT
/usr/local/bin/LITHOS < 002.INN > 002.OOT
cp LMRK_DISPLAY1.pgm ./TESTFILES/002.pgm
cp tmpl.pgm ./TESTFILES1/002.pgm
rm -f 003.OOT
/usr/local/bin/LITHOS < 003.INN > 003.OOT
cp LMRK_DISPLAY1.pgm ./TESTFILES/003.pgm
cp tmpl.pgm ./TESTFILES1/003.pgm
etc ...
}}}
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Run, just run the script to make the whole thing go == Tile Bigmap with New Maplets ==
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{{{  {{{
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== Monitor ==
Track the progress with find_nofitT
or in the background:
{{{
nohup sh run_script.b &
}}}

The [[lithos]] standard output for each image is captured in the .OOT files.

== Quality Check New Maplets ==

The user must review the .OOT files to ascertain the success of the batch image registration process, problem landmarks can be detected using the utility program [[find_nofitT]].

== Clean Working Directory ==

rem_script.b can be used to clean out the directory of make_scriptT working files once tiling is complete and user has quality checked the resulting suite of maplets:
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~/bin/find_nofitT rm -f *.INN
rm -f *.OOT
rm -f run_script*
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If there are problems with the processing, you'll get a list of landmarks with issues
{{{
  just listed - no significant issue
  * very bad - must fix
  ! not too bad - should fix
}}}

== User Warnings ==
 * The user must copy the current bigmap to MAPFILES/XXXXXX.MAP, the temporary file which the run scripts refer to throughout.

CategoryPrograms

make_scriptT

(Compiled by DL)

Purpose: Generates the run script and .INN files required to tile a bigmap or shape with a suite of new maplets.

Requires

  • make_scriptT.in - text file containing references to the bigmap and make_scriptT.seed file, and the bigmap pixel/line locations for the centers of each new maplet.

  • make_scriptT.seed - text file containing the lithos option commands for generating each maplet.

NB: lithos requires a number of directories and files - refer to relevant guide.

Output

make_scriptT outputs:

  • run_script.b - run script for maplet creation.
  • .INN files - lithos seed file for each new maplet.
  • rem_script.b - run script to clean out the directory of make_scriptT working files once tiling is complete and user has quality checked the resulting suite of maplets.

run_script.b output:

  • .OOT files - standard output from lithos for each new maplet.
  • SUMFILES/ - S/C and camera information are updated by lithos as image shifts are accepted. New landmarks and limb fits are added to the SUMFILEs;

  • LMKFILES/ - LMKFILES for each new maplet are created and populated by lithos.

  • MAPFILES/ - MAPFILES for each new maplet are created and populated by lithos.

  • a number of information text and display files in the working directory are modified by lithos; please refer to the relevant guide for details.

Using make_scriptT

There are a multitude of procedures the user should follow before running make_scriptT; please refer to the Basic_tiling 'How-To' guide.

Create Input Files

Example make_scriptT.in file (see make_scriptT.in for further details):

XXXXXX
scripts/t11-10.seed
      50   50
     100   50
     150   50
     200   50
      50  100
     100  100
     150  100
     200  100
      50  150
     100  150
     150  150
     200  150
      50  200
     100  200
     150  200
     200  200
END

Example make_scriptT.seed file (see make_scriptT.seed for further details):

0.00010,49
g
i
a
y
.5
n
x
.025
0
a
b
n
XXXXXX
n
2
b
n
XXXXXX
u
1
v
2
e
a
0,60,.25,.25,0,3
1
0
3
n
0
y


...


u
1
o
RECENT
y
1
o
RECENT
n
3
y
1, 3, 5 w
i
RECENT
n
n
v
1
u
1
v
4
o
RECENT
n
1
q
END                        

Run make_scriptT

make_scriptT generates a .INN file for each new maplet. The first five lines of the .INN file (see below) create a new landmark in lithos, with a center at the correct bigmap pixel/line location or shape model lat/wlon location. The landmark, initially monikered 'a', is auto-renamed by lithos (option g) depending on its global lat/long region, for example 'EE0001'. The bigmap is referred to via a temporary file, named XXXXXX. The user must copy the current bigmap to MAPFILES/XXXXXX.MAP.

Example 001.INN file:

c
a
m
XXXXXX
   50.000000000000000        50.000000000000000     
0.00010,49                                                                      
g                                                                               
i                                                                               
etc ...

make_scriptT also generates the run script - run_script.b:

rm -f 001.OOT
/usr/local/bin/LITHOS < 001.INN > 001.OOT
cp LMRK_DISPLAY1.pgm ./TESTFILES/001.pgm
cp tmpl.pgm ./TESTFILES1/001.pgm
rm -f 002.OOT
/usr/local/bin/LITHOS < 002.INN > 002.OOT
cp LMRK_DISPLAY1.pgm ./TESTFILES/002.pgm
cp tmpl.pgm ./TESTFILES1/002.pgm
rm -f 003.OOT
/usr/local/bin/LITHOS < 003.INN > 003.OOT
cp LMRK_DISPLAY1.pgm ./TESTFILES/003.pgm
cp tmpl.pgm ./TESTFILES1/003.pgm
etc ...

Tile Bigmap with New Maplets

sh run_script.b

or in the background:

nohup sh run_script.b &

The lithos standard output for each image is captured in the .OOT files.

Quality Check New Maplets

The user must review the .OOT files to ascertain the success of the batch image registration process, problem landmarks can be detected using the utility program find_nofitT.

Clean Working Directory

rem_script.b can be used to clean out the directory of make_scriptT working files once tiling is complete and user has quality checked the resulting suite of maplets:

rm -f *.INN
rm -f *.OOT
rm -f run_script*

User Warnings

  • The user must copy the current bigmap to MAPFILES/XXXXXX.MAP, the temporary file which the run scripts refer to throughout.

CategoryPrograms

make_scriptT (last edited 2016-07-24 09:58:33 by BMittan)