Differences between revisions 1 and 21 (spanning 20 versions)

Overview

Archiving SPC-focus products. There are two major categories (global and regional) with two subdivisions (topography and backplanes -- aka other data). The regional products are derived from bigmaps.

Tools

These tools are stored in GitHub as archivingTools.

convertLatLon - Reads an X,Y,Z (or X,Y,Z,V) list and converts it into lat, lon, distance or lat, lon, value
backplanesGMT - Reads a bigmap and generates a list of latlon, radius, albedo, slope. Use paste latlon radius > tmp for GMT.
backplanesISIS - Reads a bigmap and generates 2D matrix for radius, albedo, slope, lat, lon
phasei - Reads a bigmap and image (the SUMFILE) and generates 2D matrix for incidence, emission, phase angles
coverage_p_low -- Reads all images and maplets. Creates a pgm that has every pixel marked for every image that it has, counter is only 1.
map_coverage_p_low - Counts the number of images that cover each bigmap pixel. Creates MAPNM-cov.txt and MAPNM-cov.pgm
bustGrid - Takes an ascii grid output and puts each entry on its own line. Needed to take grid and paste it with lat/lon to make grid

Grid to GeoTIF

var=radius.ll
new=big3
argR="-R280/287/-9/-3"
argR="-R0/360/-90/90"
argI="-I0.04"

date
echo "Blockmean"
gmt blockmean $var $argR $argI  > out

echo "sphereinterpolate"
cat out |  gmt sphinterpolate $argR $argI -Gtest.nc


echo "gdal translate"
gdal_translate -of GTiff -b 1 -a_srs support/60300.prj  NETCDF:test.nc $new.tif

Global

Global ICQ resolution to bin sizes [degrees]

ICQ Q Value	Vertices	Bin Size [deg]
512	1,579,014	0.041
256	396,294	0.164
128	99,846	0.649
64	25,350	2.556
32	6,534	9.917

Topography

/bin/cp -f SHAPE.TXT tmp
vi tmp
1,$s/D/E/g
ZZ
convertLatLon tmp > radius.ll

Sigmas

```
convertLatLon tmp 1 > sigma.ll 
```

Use sigma.ll as the input to GMT

Number of Images

Run globalStat

Use global-cov.ll as the input to GMT

var=global-cov.ll
new=tCov
argR="-R0/360/-90/90"
argI="-I1"

Best Resolution

Run globalStat

Use global-res as the input to GMT

var=global-res.ll
new=tRes
argR="-R0/360/-90/90"
argI="-I1"

Slope

Albedo

/bin/cp -f SHAPEA.TXT tmp
vi tmp
1,$s/D/E/g
ZZ
convertLatLon tmp 1 > albedo.ll

Regional

Run backplanesGMT (which is in ORExSPCsupport) (or backplanesISIS)

Topography

Run backplanesGMT

  name=EQLEAD
  paste lonlat $name-r > tmp.ll
  var=tmp.ll
  argR="-R0/360/-90/90"
  argI="-I0.04"

  echo "Blockmean"
  gmt blockmean $var $argR $argI  > out
  echo "sphereinterpolate"
  cat out |  gmt sphinterpolate $argR $argI -Gtest.nc
  echo "gdal translate"
  gdal_translate -of GTiff -b 1 -a_srs 60300.prj  NETCDF:test.nc new.tif
  echo "Done" `date`

Slope

* See topography

Albedo

* See topography

Sigmas

Run backplanesGMT (this gets lon/lat only file)

Take the SIGMAS.pgm and convert it to lon/lat/val files

   name=EQLEAD
   std2isis from=SIGMAS.pgm to=tmp.cub
   isis2ascii from=tmp.cub to=tmp1.txt
   sed '1,2d' tmp1.txt > tmp2.txt
    ~/bin/bustGrid tmp2.txt > tmp3.txt
   paste $name-lonlat.txt tmp3.txt > sigma.ll

Continue with topography script

Number of Images

run map_coverage_p_low

Convert coverage out to lon/lat/value

   name=EQLEAD
   bustGrid $name-cov.txt > tmp1.txt
   paste latlon.txt tmp1.txt > imgNum.ll
   var=imgNum.ll

* Continue with topography script

Photometric Data

This includes emission angle, incidence angle and phase angle.

Run phasei (located in ORExSPCsupport)

Make Pretties

gmt begin GMT_cont
gmt set GMT_THEME cookbook
gmt grdcontour test.nc
gmt end show
#gmt grdcontour test.nc -C10 -A50

gmt begin GMT_img
gmt set GMT_THEME cookbook
#gmt makecpt -Crainbow
gmt grdimage test.nc  -JM6i -B -BWSnE
gmt colorbar -DJTC -Bxa -By+lm
gmt end show


gmt begin GMT_img
gmt makecpt -Crainbow
gmt set GMT_THEME cookbook
gmt grdimage test.nc  $argR  -JM6i -B -BWSnE
#gmt colorbar -DJTC -I0.4 -Bxa -By+lm
gmt colorbar -DJTC -Bxa -By+lm
gmt end show

Setup

Use Dropbox spcShare directory

cd /opt/local/spc/
relink ~/Dropbox/spcShare/Tethys .

Then in the working directory

relink.sh /opt/local/spc/Tethys/support .
relink.sh /opt/local/spc/Tethys/mapConfig .

-  ⇤ ← Revision 1 as of 2021-06-16 12:15:15 → 
  Size: 581
  Editor: EricPalmer
  Comment:
+   ← Revision 21 as of 2021-06-28 09:20:05 → ⇥
  Size: 4827
  Editor: EricPalmer
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 1:
-= Global =
+= Overview =

Archiving SPC-focus products.  There are two major categories (global and regional) with two subdivisions (topography and backplanes -- aka other data).  The regional products are derived from bigmaps.

=== Tools ===
These tools are stored in GitHub as [[https://github.com/StereoPhotoClinometry/archivingTools|archivingTools]].


 * [[convertLatLon]] - Reads an X,Y,Z (or X,Y,Z,V) list and converts it into lat, lon, distance or lat, lon, value
 * [[backplanesGMT]] - Reads a bigmap and generates a list of latlon, radius, albedo, slope.  Use paste latlon radius > tmp for GMT. 
 * [[backplanesISIS]] - Reads a bigmap and generates 2D matrix for radius, albedo, slope, lat, lon
 * [[phasei]] - Reads a bigmap and image (the SUMFILE) and generates 2D matrix for incidence, emission, phase angles
 * coverage_p_low -- Reads all images and maplets.  Creates a pgm that has every pixel marked for every image that it has, counter is only 1.
 * [[map_coverage_p_low]] - Counts the number of images that cover each bigmap pixel.  Creates MAPNM-cov.txt and MAPNM-cov.pgm
 * [[bustGrid]] - Takes an ascii grid output and puts each entry on its own line.  Needed to take grid and paste it with lat/lon to make grid

 

--------

= Grid to GeoTIF =
-Line 21:
+Line 40:
-gdal_translate -of GTiff -b 1 -a_srs 60300.prj  NETCDF:test.nc $new.tif


}}}
+gdal_translate -of GTiff -b 1 -a_srs support/60300.prj  NETCDF:test.nc $new.tif


}}}



------


= Global =

Global ICQ resolution to bin sizes [degrees]
|| ICQ Q Value || Vertices || Bin Size [deg] ||
|| 512 || 1,579,014 || 0.041 ||
|| 256 || 396,294 || 0.164 ||
|| 128 || 99,846 || 0.649 ||
|| 64 || 25,350 || 2.556 ||
|| 32 || 6,534 || 9.917 ||
-Line 28:
+Line 65:
+   {{{
/bin/cp -f SHAPE.TXT tmp
vi tmp
1,$s/D/E/g
ZZ
convertLatLon tmp > radius.ll
   }}}
-Line 30:
+Line 80:
+   {{{
convertLatLon tmp 1 > sigma.ll 
   }}}
 * Use sigma.ll as the input to GMT
-Line 32:
+Line 88:
+ * Run globalStat
 * Use global-cov.ll as the input to GMT
   {{{
var=global-cov.ll
new=tCov
argR="-R0/360/-90/90"
argI="-I1"
}}}


== Best Resolution ==

 * Run globalStat
 * Use global-res as the input to GMT
   {{{
var=global-res.ll
new=tRes
argR="-R0/360/-90/90"
argI="-I1"
}}}
-Line 34:
+Line 112:
-Line 35:
+Line 116:
+   {{{
/bin/cp -f SHAPEA.TXT tmp
vi tmp
1,$s/D/E/g
ZZ
convertLatLon tmp 1 > albedo.ll
   }}}
-Line 39:
+Line 127:
-Line 41:
+Line 130:
+Run backplanesGMT (which is in ORExSPCsupport) (or backplanesISIS)
-Line 42:
+Line 135:
+ * Run backplanesGMT
   {{{
  name=EQLEAD
  paste lonlat $name-r > tmp.ll
  var=tmp.ll
  argR="-R0/360/-90/90"
  argI="-I0.04"

  echo "Blockmean"
  gmt blockmean $var $argR $argI  > out
  echo "sphereinterpolate"
  cat out |  gmt sphinterpolate $argR $argI -Gtest.nc
  echo "gdal translate"
  gdal_translate -of GTiff -b 1 -a_srs 60300.prj  NETCDF:test.nc new.tif
  echo "Done" `date`

}}}

== Slope ==

* See topography

== Albedo ==
* See topography
-Line 45:
+Line 162:
+ * Run backplanesGMT (this gets lon/lat only file)
 * Take the SIGMAS.pgm and convert it to lon/lat/val files

   {{{
   name=EQLEAD
   std2isis from=SIGMAS.pgm to=tmp.cub
   isis2ascii from=tmp.cub to=tmp1.txt
   sed '1,2d' tmp1.txt > tmp2.txt
    ~/bin/bustGrid tmp2.txt > tmp3.txt
   paste $name-lonlat.txt tmp3.txt > sigma.ll
   }}}
 * Continue with topography script
-Line 47:
+Line 178:
-== Slope ==

== Albedo ==
+ * run map_coverage_p_low
 * Convert coverage out to lon/lat/value
   {{{
   name=EQLEAD
   bustGrid $name-cov.txt > tmp1.txt
   paste latlon.txt tmp1.txt > imgNum.ll
   var=imgNum.ll
   }}}
 
* Continue with topography script


== Photometric Data ==

This includes emission angle, incidence angle and phase angle.

Run phasei (located in ORExSPCsupport)

--------

= Make Pretties =

{{{
gmt begin GMT_cont
gmt set GMT_THEME cookbook
gmt grdcontour test.nc
gmt end show
#gmt grdcontour test.nc -C10 -A50

gmt begin GMT_img
gmt set GMT_THEME cookbook
#gmt makecpt -Crainbow
gmt grdimage test.nc  -JM6i -B -BWSnE
gmt colorbar -DJTC -Bxa -By+lm
gmt end show


gmt begin GMT_img
gmt makecpt -Crainbow
gmt set GMT_THEME cookbook
gmt grdimage test.nc  $argR  -JM6i -B -BWSnE
#gmt colorbar -DJTC -I0.4 -Bxa -By+lm
gmt colorbar -DJTC -Bxa -By+lm
gmt end show


}}}




== Setup ==
Use Dropbox spcShare directory

 {{{
cd /opt/local/spc/
relink ~/Dropbox/spcShare/Tethys .
 }}}

Then in the working directory


 {{{
relink.sh /opt/local/spc/Tethys/support .
relink.sh /opt/local/spc/Tethys/mapConfig .

 }}}