How to Tile - Bigmap V0

Description

This block tiles a bigmap with a new suite of landmarks. Bigmap and maplet parameters are sepcified by the user, using the bigmap in files contained in /SPC_Test/F3-base/base/support/ and the lithos options contained in the seed files in /SPC_Test/F3-base/base/scripts/.

Assumptions

• You have invoked a Bourne-Again Shell (bash) on ormacsrv1.lpl.arizona.edu
• You are a member of the group OREX\spc
• You have set up a skeleton directory in the following format:

 /SPC_Test/F3G-Nav/
                   ORex/
                            DATA/
                   base/
                            IMAGEFILES/
                            SHAPEFILES/
                   lsupport/
                   orig/
                   results/
                   test/

• You have completed the processing steps in How to Test Directory Set-Up - ORIG

• You have set up the test sub-directory following the steps in Block 01-02 - TEST DIRECTORY SET-UP - TEST
• You have ingested and registered test images following the steps in Blocks 02-01, 02-02, and 03.01

User inputs

• testID - Name of the F3 test directory (for example, F3E-Limbs)

• subTestID (if required) - Identifier for sub-test work (for example, F3G1)

• bigmapInFileNm - Name of bigmap .in file located in /SPC_Test/F3-base/base/support/ (for example, TILE20)

• tilingSeedFileNm - Name of tiling seeed file located in /SPC_Test/F3-base/base/scrits/ (for example, XXX020)

• gSD - Maplet Ground Sample Distance in km (for example, 0.0002)

• blockID - User-specified identifier for typescript textfile name (for example, Block-05-01-Tile-Bigmap-F3G1-20cmTiling)

Procedure

Copy and paste the following lines in the Unix terminal, only changing for your inputs and variances. Comment lines (# or ##) will appear in the typescript output.

# User inputs:
testID=F3G-Nav
#subTestID=F3G1
#subTestID=F3G2
#subTestID=F3G3
#subTestID=F3G4
#subTestID=F3G5
#subTestID=F3G6
subTestID=F3G7
#export bigmapInFileNm=TILE20
#export bigmapInFileNm=TILE10
export bigmapInFileNm=TILE05
#export tilingSeedFileNm=XXX020
#export tilingSeedFileNm=XXX010
export tilingSeedFileNm=XXX005
#export gSD=0.0002
#export gSD=0.0001
export gSD=0.00005
blockID=Block-05-01-Tile-Bigmap-${subTestID}-${bigmapInFileNm}

# Set-Up
cd /SPC_Test/$testID/test/
script
date
pwd
ls -l

# Make tiling bigmap
echo "Bigmap .in file: support/${bigmapInFileNm}.in"
cat support/${bigmapInFileNm}.in
ls -l /usr/local/bin/bigmap
bigmap < support/${bigmapInFileNm}.in | tee log-${bigmapInFileNm}

# check resulting file
## Tiling bigmap has the same name as the .in file, 
## i.e. TILE20.in, produces the tiling bigmap: TILE20
echo ${bigmapInFileNm} | showmap
convert ${bigmapInFileNm}.pgm ${bigmapInFileNm}.jpg
open ${bigmapInFileNm}.jpg

# Set up tiling
cp MAPFILES/${bigmapInFileNm}.MAP MAPFILES/XXXXXX.MAP
ls -l /usr/local/bin/map_coverage
echo "XXXXXX" > map_coverage.in
echo 0 >> map_coverage.in
echo $gSD >> map_coverage.in
map_coverage < map_coverage.in
convert coverage_m.pgm coverage_m-${bigmapInFileNm}-beforeTiling.jpg
open coverage_m-${bigmapInFileNm}-beforeTiling.jpg
echo "N" | make_tilefile | tee make_tilefile.out
sed 1d make_tilefile.out > temp.out
echo "XXXXXX" > make_scriptT.in
echo "scripts/${tilingSeedFileNm}.seed" >> make_scriptT.in
cat temp.out >> make_scriptT.in 
cat make_scriptT.in
make_scriptT
ls -l

# Invoke tiling script
cat INIT_LITHOS.TXT
lithos -v
nohup sh run_script.b &

# Monitor progress
ls -l *.INN *.OOT
find_nofitT
sh support/logEvalP.sh

# Check results - correlation
find_nofitT | tee log-fitT-${bigmapInFileNm}
sh support/logEvalP.sh
cat logResults.txt 
cat lowImg.txt
cat redo.txt

# Fix uncorrelated images
.........

# Check results - tiling
map_coverage < map_coverage.in
convert coverage_m.pgm coverage_m-${bigmapInFileNm}-afterTiling.jpg
open coverage_m-${bigmapInFileNm}-afterTiling.jpg

# Fix tiling gaps
.........

# Clean directory
sh rem_script.b
rm TESTFILES/*
rm TESTFILES1/*

# Block Complete
exit
# Save block log
if [ ! -d /SPC_Test/$testID/log ]; then
  mkdir /SPC_Test/$testID/log
fi
mv typescript /SPC_Test/$testID/log/log-typescript-${blockID}

(Compiled by DL)

CategoryHowTos