How to Tile - Bigmap V0
Description
This block tiles a bigmap with a new suite of landmarks. Bigmap and maplet parameters are specified by the user, using the bigmap in files contained in /SPC_Test/F3-base/base/support/ and the lithos options contained in the seed files in /SPC_Test/F3-base/base/scripts/.
Assumptions
- You have invoked a Bourne-Again Shell (bash) on ormacsrv1.lpl.arizona.edu
- You are a member of the group OREX\spc
- You have set up a skeleton directory in the following format:
/SPC_Test/F3G-Nav/
ORex/
DATA/
base/
IMAGEFILES/
SHAPEFILES/
lsupport/
orig/
results/
test/- You have completed the processing steps in How to Test Directory Set-Up - ORIG
- You have set up the test sub-directory following the steps in How to Test Directory Set-Up - TEST
- You have ingested and registered test images following the steps in:
- How to Ingest Images - Test-Specific
- How to ?????????
- How to Register Images - Batch
User inputs
testID - Name of the F3 test directory (for example, 'F3E-Limbs')
subTestID (if required) - Identifier for sub-test work (for example, 'F3G1')
bigmapInFileNm - Name of bigmap .in file located in /SPC_Test/F3-base/base/support/ (for example, 'TILE20')
tilingSeedFileNm - Name of tiling seeed file located in /SPC_Test/F3-base/base/scrits/ (for example, 'XXX020')
gSD - Maplet Ground Sample Distance in km (for example, '0.0002')
blockID - User-specified identifier for typescript textfile name (for example, 'Block-05-01-Tile-Bigmap-F3G1-20cmTiling')
Procedure
1. Initial Inputs
# User inputs:
testID=F3G-Nav
#subTestID=F3G1
#subTestID=F3G2
#subTestID=F3G3
#subTestID=F3G4
#subTestID=F3G5
#subTestID=F3G6
subTestID=F3G7
#export bigmapInFileNm=TILE20
#export bigmapInFileNm=TILE10
export bigmapInFileNm=TILE05
#export tilingSeedFileNm=XXX020
#export tilingSeedFileNm=XXX010
export tilingSeedFileNm=XXX005
#export gSD=0.0002
#export gSD=0.0001
export gSD=0.00005
blockID=Block-05-01-Tile-Bigmap-${subTestID}-${bigmapInFileNm}
2. Set-up
# Set-Up cd /SPC_Test/$testID/test/ script date pwd ls -l
3. Make tiling bigmap
# Make tiling bigmap
echo "Bigmap .in file: support/${bigmapInFileNm}.in"
cat support/${bigmapInFileNm}.in
ls -l /usr/local/bin/bigmap
bigmap < support/${bigmapInFileNm}.in | tee log-${bigmapInFileNm}
4. Check resulting file
# check resulting file
## Tiling bigmap has the same name as the .in file,
## i.e. TILE20.in, produces the tiling bigmap: TILE20
echo ${bigmapInFileNm} | showmap
convert ${bigmapInFileNm}.pgm ${bigmapInFileNm}.jpg
open ${bigmapInFileNm}.jpg
5. Setup tiling
# Set up tiling
cp MAPFILES/${bigmapInFileNm}.MAP MAPFILES/XXXXXX.MAP
ls -l /usr/local/bin/map_coverage
echo "XXXXXX" > map_coverage.in
echo 0 >> map_coverage.in
echo $gSD >> map_coverage.in
map_coverage < map_coverage.in
convert coverage_m.pgm coverage_m-${bigmapInFileNm}-beforeTiling.jpg
open coverage_m-${bigmapInFileNm}-beforeTiling.jpg
echo "N" | make_tilefile | tee make_tilefile.out
sed 1d make_tilefile.out > temp.out
echo "XXXXXX" > make_scriptT.in
echo "scripts/${tilingSeedFileNm}.seed" >> make_scriptT.in
cat temp.out >> make_scriptT.in
cat make_scriptT.in
make_scriptT
ls -l
6. Invoke tiling script
# Invoke tiling script cat INIT_LITHOS.TXT lithos -v nohup sh run_script.b &
7. Monitor progress
# Monitor progress ls -l *.INN *.OOT find_nofitT sh support/logEvalP.sh
8. Check correlation results
# Check results - correlation
find_nofitT | tee log-fitT-${bigmapInFileNm}
sh support/logEvalP.sh
cat logResults.txt
cat lowImg.txt
cat redo.txt
9. Fix uncorrelated images
# Fix uncorrelated images .........
10. Check tiling results
# Check results - tiling
map_coverage < map_coverage.in
convert coverage_m.pgm coverage_m-${bigmapInFileNm}-afterTiling.jpg
open coverage_m-${bigmapInFileNm}-afterTiling.jpg
11. Fix tiling gaps
# Fix tiling gaps .........
12. Clean directory
# Clean directory sh rem_script.b rm TESTFILES/* rm TESTFILES1/*
13. Complete procedure
# Block Complete
exit
# Save block log
if [ ! -d /SPC_Test/$testID/log ]; then
mkdir /SPC_Test/$testID/log
fi
mv typescript /SPC_Test/$testID/log/log-typescript-${blockID}
(Compiled by DL)