Test F3E Iterate
Description
This block iterates a set of landmarks specified by the user, using the lithosP options contained in the file /SPC_Test/F3-base/base/scripts.make_scriptP.seed.
Assumptions
- You have invoked a Bourne-Again Shell (bash) on ormacsrv1.lpl.arizona.edu
- You are a member of the group OREX\spc
- You have set up a skeleton directory in the following format:
- You have completed the processing steps in Block 1 - Setup Directory
User inputs
Procedure
1. Initial Inputs
# User inputs:
2. Set-up
# Set-Up cd /SPC_Test/workingDirectory script date pwd ls -l
3. Set-up batch iteration files
Scenario - Full list of landmarks
# Set-up batch iteration files ## SCENARIO 1: Iterate all landmarks lised in LMRKLIST.TXT cp LMRKLIST.TXT LIST.TXT duplicates ## END OF SCENARIO 1
Scenario - Recently Tiled
## SCENARIO 2: Iterate landmarks that were just created by tiling cp LMRKLIST1.TXT LIST.TXT duplicates ## END OF SCENARIO 2
Scenario - List of landmarks from a region (BIGMAP)
## SCENARIO 3: Iterate landmarks which overlap a region-of-interest defined via a bigmap .in file ## TAG100.in is a 100m x 100m region around the center of TAG site 1 cat lsupport/TAG100.in ls -l /usr/local/bin/bigmap bigmap < lsupport/TAG100.in cp USED_MAPS.TXT LIST.TXT duplicates ## END OF SCENARIO 3
Finish Setup
cat make_script.in ls -l /usr/local/bin/MAKE_LMRKLISTX MAKE_LMRKLISTX cp scripts/make_scriptP.seed . cat make_scriptP.seed make_scriptP | tee run.sh ls -l
4. Invoke batch iteration
# Invoke batch iteration cat INIT_LITHOS.TXT lithosP -v nohup sh run.sh &
5. Monitor progress
# Monitor progress ls ls -l *.INN *.OOT find_nofitP sh support/logEvalP.sh
6. Check results
# Check results find_nofitP | tee log-fitP sh support/logEvalP.sh cat logResults.txt cat lowImg.txt cat redo.txt
8. Clean directory
# Clean directory sh rem_script.b rm TESTFILES/* rm TESTFILES1/*
9. Complete procedure
# Block Complete exit # Save block log mv typescript <newname>
(Compiled by DL)