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| Compiled by KD | ||Category B||Version 3.0|| |
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| At the end of each tiling or iteration, a form of find_nofit (T or P) is used to check for bad landmarks. | == Description == |
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| * find_nofitT - this routine shows which maplets created during tiling that are faulty. | This program searches batch processing output files to identify landmarks or images which may need further work. |
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| * find_nofitP - this routine shows which maplet created during iteration that are faulty. | '''find_nofitT''' is a useful utility for identifying landmarks which may require further work following the batch tiling task set up using [[make_scriptT]]. |
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| The routines listed above determine faulty maplets by going through every .OOT file in the working directory, which are produced at the end of tiling and iteration when run_script.sh or run.sh are used. | === Required Files === * <NNN>.OOT files - [[lithos]] standard output listings === Output Files === * [[NEW_LIST.TXT]] - List of new landmarks generated during the tiling process. ----------- == Using find_nofitT == The batch process initiated by [[make_scriptT]] produces output file <NNN>.OOT that contains listings of the outputs of procedure [[lithos]] for each created landmark during a tiling run. '''find_nofitT''' looks through these output files to find places where the landmarks or images may need further work. During tiling, each new landmark is given a 6-character name <LMKNM>. The original landmark designation is a three digit number <NNN>. The '''find_nofitT''' procedure identifies: {{{ <NNN> ! cat <NNN>.OOT: process still running or terminated in error. <NNN> deleted: insufficient data to create a maplet at that point. <LMKNM> * cat <NNN>.OOT: maplet correlating weakly or not at all with at least one image. <LMKNM> cat <NNN>.OOT: low or no correlation for at least one overlap. }}} The command 'cat <NNN>.OOT' provides a listing of the output file for more complete diagnostics. The surviving landmark names are included at the beginning of the output to make re-processing easier. The limit for weak correlation is set by the 'NOFIT=' keyword in [[INIT_LITHOS.TXT]]. |
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| === Input === * <3 digit number>.OOT files in the working directory === Output === * ! - currently running (logfile isn't complete) or there was an error and the landmark was deleted * (blank space) LMKNM - minor issue * * LMKNM - major issue (at least one image didn't correlate at all the with the map) * . LMKNM - minor issue (at least one maplet overlap error) * + LMKNM - moderate issue (at least one image had a correlation below the value set in init_lithos - usually .3 or .4) == Example of Output == |
Here is an annotated sample output from '''find_nofitT''': |
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| EQ0004: cat 004.OOT | EQ0004: cat 004.OOT <- low or no correlation for at least one overlap |
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| EN0003: * cat 008.OOT | EN0003: * cat 008.OOT <- maplet correlating weakly or not at all with at least one image |
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| EM0003: . cat 010.OOT EM0004: * cat 011.OOT 132 deleted ! cat 132.OOTThe |
010 deleted ! cat 010.OOT <- insufficient data to create a maplet at that point EM0003: cat 011.OOT EM0004: * cat 012.OOT }}} Here is a sample [[NEW_LIST.TXT]] from '''find_nofitT''': {{{ EP0001 EP0002 EP0003 EP0004 EQ0001 EQ0002 EQ0003 EQ0004 END |
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| == John's notes == !ZN0205 cat 023.OOT process still running (okay) or process didn’t finish normally (bummer). |
---------- ''(Compiled by KD)'' |
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| ZN0205 cat 023.OOT no correlation in at least one maplet overlap. Probably no big deal. * ZN0205 cat 023.OOT small or no correlation in at least one maplet-image overlap. Should be checked by hand in LITHOS. ---- |
find_nofitT
Category B |
Version 3.0 |
Description
This program searches batch processing output files to identify landmarks or images which may need further work.
find_nofitT is a useful utility for identifying landmarks which may require further work following the batch tiling task set up using make_scriptT.
Required Files
<NNN>.OOT files - lithos standard output listings
Output Files
NEW_LIST.TXT - List of new landmarks generated during the tiling process.
Using find_nofitT
The batch process initiated by make_scriptT produces output file <NNN>.OOT that contains listings of the outputs of procedure lithos for each created landmark during a tiling run. find_nofitT looks through these output files to find places where the landmarks or images may need further work. During tiling, each new landmark is given a 6-character name <LMKNM>. The original landmark designation is a three digit number <NNN>.
The find_nofitT procedure identifies:
<NNN> ! cat <NNN>.OOT: process still running or terminated in error. <NNN> deleted: insufficient data to create a maplet at that point. <LMKNM> * cat <NNN>.OOT: maplet correlating weakly or not at all with at least one image. <LMKNM> cat <NNN>.OOT: low or no correlation for at least one overlap.
The command 'cat <NNN>.OOT' provides a listing of the output file for more complete diagnostics. The surviving landmark names are included at the beginning of the output to make re-processing easier.
The limit for weak correlation is set by the 'NOFIT=' keyword in INIT_LITHOS.TXT.
Here is an annotated sample output from find_nofitT:
EQ0004: cat 004.OOT <- low or no correlation for at least one overlap EP0002: cat 005.OOT EP0003: cat 006.OOT EO0003: cat 007.OOT EN0003: * cat 008.OOT <- maplet correlating weakly or not at all with at least one image EN0004: * cat 009.OOT 010 deleted ! cat 010.OOT <- insufficient data to create a maplet at that point EM0003: cat 011.OOT EM0004: * cat 012.OOT
Here is a sample NEW_LIST.TXT from find_nofitT:
EP0001 EP0002 EP0003 EP0004 EQ0001 EQ0002 EQ0003 EQ0004 END
(Compiled by KD)